Index: doc/reference.conf
--- doc/reference.conf.orig
+++ doc/reference.conf
@@ -30,7 +30,7 @@ options {
 	 * Full path and filename for storing the process ID of the running
 	 * HOPM.
 	 */
-	pidfile = "var/run/hopm.pid";
+	pidfile = "/var/run/hopm/hopm.pid";
 
 	/*
 	 * Maximum commands to queue. Set to 0 if you don't want HOPM
@@ -92,7 +92,7 @@ options {
 	 * the scan in question can be useful. Leave commented for no
 	 * logging.
 	 */
-#	scanlog = "var/log/scan.log";
+#	scanlog = "/var/log/hopm/scan.log";
 };
 
 
@@ -156,13 +156,13 @@ irc {
 	 *    chown <ircd-user>.<ircd.group> rsa.key
 	 *    chmod 0600 rsa.key
 	 */
-#	rsa_private_key_file = "etc/rsa.key";
+#	rsa_private_key_file = "/etc/hopm/rsa.key";
 
 	/*
 	 * tls_certificate_file: the path to the file containing our
 	 * TLS certificate for encrypted client connection.
 	 */
-#	tls_certificate_file = "etc/cert.pem";
+#	tls_certificate_file = "/etc/hopm/cert.pem";
 
 	/*
 	 * Checks if the host name defined above matches the identity in the
